Resolving 5-Year Shopify Reconciliation Backlog for One of the Leading Health & Fitness Supplements Provider

Our Client

Industry: E-commerce (Health Supplements, Apparel, Accessories) 

Founded: 2014 

Annual Turnover: AUD $50 Million

Our one of the health supplement provider clients stands as a leading Australian online retailer in health supplements, activewear, and accessories. With a mission to deliver authentic, all-natural products and an unwavering focus on quality, our client experienced robust growth through its Shopify-powered e-commerce platform. However, sustained growth introduced operational complexity and a mounting reconciliation backlog that needed urgent remediation. 

Pre-Engagement Challenges

Before our engagement, we identified the following issues: 

  • High Transaction Volumes: Rapid expansion drove vast volumes across Shopify and multiple payment gateways, overwhelming their manual workflows. 
  • Disparate Data Sources: Unintegrated systems delayed reporting and complicated data matching. 
  • Manual Entry Pitfalls: Extensive spreadsheet use for B2B orders increased the risk of errors. 
  • Inventory & Refund Complexities: Frequent inventory changes and refunds complicated accurate financial matching. 
  • Financial Inaccuracies: Five years and over a million unreconciled transactions left the finance team wrestling with aged debtors and unreliable financial reports. 
  • Compliance Risks: Untimely and inaccurate data increased the risk of non-compliance with Australian accounting standards, GST, and BAS regulations. 

Business Avengers’ Approach

After engaging Business Avengers, the following structured approach was implemented to resolve the backlog and optimize the reconciliation workflow: 

1. Diagnostic Review

  • Conducted a detailed assessment of all Shopify sales, payment gateway statements, and reconciliation processes. 
  • Pinpointed gaps in transaction flow and sources of unreconciled entries. 
  • Mapped journal entries from order initiation through payment. 
  • Identified unfulfilled or pending sales orders and underlying causes. 
  • Developed a standardized reconciliation template to guide resolution. 

2. Platform Integration

  • Automated data feeds for sales, fees, and refunds to reduce manual effort and errors. 

3. Clearing Account Setup 

  • Creating dedicated clearing accounts for each payment gateway (Shopify, PayPal, Afterpay, Zip Pay). 
  • Automated reconciliation routines to match sales with bank deposits, aligned for merchant fees and settlement cycles. 

4. Inventory and Refund Automation

  • Addressed missing inventory issues by reconciling system stock with order data. 
  • Integrated inventory management software with financial records. 
  • Automated processing of refunds and chargebacks to ensure accurate GST treatment and inventory adjustment. 

5. Reporting

  • Delivered real-time dashboards, enhancing transparency for finance and operations teams. 
  • Deployed a user-friendly reconciliation template, highlighting unresolved orders for rapid follow-up. 

Results with Business Avengers

Metric/Outcome
Before Business Avengers
After Implementation

Reconciliation Backlog 

5+ years 

No backlog, Reconciliations done monthly 

Financial Impact 

1M+ orders stuck for 5 years 

1M+ orders released to revenue; 60% GP, $600K direct to bottom line 

Manual Hours per Month 

60+ 

< 10 

Error Rate 

High (frequent mismatches) 

Minimal (automated checks) 

BAS/GST Compliance 

At risk 

Fully compliant 

Financial Reporting Lag 

Delayed 

Real-time 

Key Learnings

  • Automation is Critical: Automated data integration ensures scalability and risk reduction as the business grows. 
  • Sector Knowledge Matters: Deep understanding of Shopify’s payout schedules, merchant fees, and refund processes is vital. 
  • Compliance is Non-Negotiable: Timely and accurate reporting not only avoids regulatory penalties, it supports future growth initiatives. 

Final Thoughts

The partnership with Business Avengers transformed our client’s reconciliation process from an error-prone, manual operation to a seamless, automated workflow. Financial clarity was restored, compliance issues resolved, and the finance team is now empowered to focus on strategic objectives rather than tedious administrative tasks. 

This case underscores the importance of e-commerce-specific expertise and the benefits of financial process automation for scaling businesses. 

FAQs

1. What is financial reconciliation in e-commerce?

Financial reconciliation in e-commerce involves matching transactions from sales platforms, payment gateways, and bank accounts to ensure all orders, refunds, and fees are accurately recorded and settled . This process is crucial for maintaining precise financial records .

2. Why is accurate financial reconciliation important for online businesses?

Accurate financial reconciliation is vital because it helps businesses manage high volumes of sales, identify discrepancies, ensure correct tax calculations, and track refunds and chargebacks effectively . It boosts confidence in financial reporting and helps maintain compliance .

3. What common financial challenges do growing e-commerce businesses face?

Growing e-commerce businesses often struggle with high transaction volumes, disparate data sources, manual entry errors, and complexities related to inventory and refunds. These can lead to financial inaccuracies and compliance risks .

4. How can Business Avengers help resolve a backlog of unreconciled transactions?

Business Avengers can resolve transaction backlogs by conducting detailed diagnostic reviews, integrating platforms to automate data feeds, setting up clearing accounts for payment gateways, and automating inventory and refund processes This approach transforms manual operations into smooth workflows.

5.How does Business Avengers improve financial reporting for e-commerce companies?

Business Avengers enhances financial reporting by delivering real-time dashboards and user-friendly reconciliation templates that highlight unresolved orders. This provides enhanced transparency for finance and operations teams, improving visibility into financial operations.

6. Can Business Avengers help reduce manual work in financial processes?

Yes, Business Avengers significantly reduces manual hours by automating data integration and reconciliation routines. This allows finance teams to focus on strategic objectives rather than administrative tasks .

7. How does Business Avengers ensure regulatory compliance for e-commerce businesses?

Business Avengers ensures regulatory compliance by providing timely and accurate financial data, which is essential for meeting accounting standards and avoiding penalties. Our solutions help businesses become fully compliant by resolving issues like unreconciled transactions .